diff --git a/.travis.yml b/.travis.yml
index 0ff068a..30dd864 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -6,11 +6,11 @@ python:
before_install:
- sudo apt-get update -qq
- sudo apt-get install -qq libopenjpeg2
+ - sudo apt-get install -qq python-numpy
+ - sudo apt-get install -qq python3-numpy
# command to install dependencies
install:
- - pip install numpy -q --use-mirrors
- - pip install matplotlib --use-mirrors
- pip install . --use-mirrors
# command to run tests
script:
diff --git a/glymur/jp2k.py b/glymur/jp2k.py
index d5c604c..bd90dfe 100644
--- a/glymur/jp2k.py
+++ b/glymur/jp2k.py
@@ -636,6 +636,19 @@ class Jp2k(Jp2kBox):
"""
self._subsampling_sanity_check()
+ if rlevel != 0:
+ # Must check the specified rlevel against the maximum.
+ # OpenJPEG 1.3 will segfault if rlevel is too high.
+ codestream = self.get_codestream()
+ max_rlevel = codestream.segment[2].spcod[4]
+ if rlevel == -1:
+ # -1 is shorthand for the largest rlevel
+ rlevel = max_rlevel
+ if rlevel < -1 or rlevel > max_rlevel:
+ msg = "rlevel must be in the range [-1, {0}] for this image."
+ msg = msg.format(max_rlevel)
+ raise IOError(msg)
+
with ExitStack() as stack:
# Set decoding parameters.
dparameters = opj.DecompressionParametersType()
diff --git a/glymur/test/test_config.py b/glymur/test/test_config.py
index 3a70ee1..af95bd3 100644
--- a/glymur/test/test_config.py
+++ b/glymur/test/test_config.py
@@ -90,5 +90,48 @@ class TestSuite(unittest.TestCase):
with self.assertWarns(UserWarning):
imp.reload(glymur.lib.openjp2)
+
+@unittest.skipIf(glymur.lib.openjp2.OPENJP2 is None and
+ glymur.lib.openjpeg.OPENJPEG is None,
+ "Missing openjp2 library.")
+class TestConfig(unittest.TestCase):
+ """Test suite for reading without proper library in place."""
+
+ def setUp(self):
+ self.jp2file = glymur.data.nemo()
+ self.j2kfile = glymur.data.goodstuff()
+
+ def tearDown(self):
+ pass
+
+ def test_read_without_library(self):
+ """Don't have either openjp2 or openjpeg libraries? Must error out.
+ """
+ with patch('glymur.lib.openjp2.OPENJP2', new=None):
+ with patch('glymur.lib.openjpeg.OPENJPEG', new=None):
+ with self.assertRaises(glymur.jp2k.LibraryNotFoundError):
+ glymur.Jp2k(self.jp2file).read()
+
+ def test_read_bands_without_library(self):
+ """Don't have openjp2 library? Must error out.
+ """
+ with patch('glymur.lib.openjp2.OPENJP2', new=None):
+ with patch('glymur.lib.openjpeg.OPENJPEG', new=None):
+ with self.assertRaises(glymur.jp2k.LibraryNotFoundError):
+ glymur.Jp2k(self.jp2file).read_bands()
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_write_without_library(self):
+ """Don't have openjp2 library? Must error out.
+ """
+ data = glymur.Jp2k(self.j2kfile).read()
+ with patch('glymur.lib.openjp2.OPENJP2', new=None):
+ with patch('glymur.lib.openjpeg.OPENJPEG', new=None):
+ with self.assertRaises(glymur.jp2k.LibraryNotFoundError):
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ ofile = Jp2k(tfile.name, 'wb')
+ ofile.write(data)
+
+
if __name__ == "__main__":
unittest.main()
diff --git a/glymur/test/test_jp2k.py b/glymur/test/test_jp2k.py
index 747782f..ea19199 100644
--- a/glymur/test/test_jp2k.py
+++ b/glymur/test/test_jp2k.py
@@ -38,6 +38,7 @@ import glymur
from glymur import Jp2k
from .fixtures import OPENJP2_IS_V2_OFFICIAL
+from .fixtures import OPENJPEG_VERSION
try:
DATA_ROOT = os.environ['OPJ_DATA_ROOT']
@@ -65,48 +66,6 @@ def load_tests(loader, tests, ignore):
return tests
-@unittest.skipIf(glymur.lib.openjp2.OPENJP2 is None and
- glymur.lib.openjpeg.OPENJPEG is None,
- "Missing openjp2 library.")
-class TestConfig(unittest.TestCase):
- """Test suite for reading without proper library in place."""
-
- def setUp(self):
- self.jp2file = glymur.data.nemo()
- self.j2kfile = glymur.data.goodstuff()
-
- def tearDown(self):
- pass
-
- def test_read_without_library(self):
- """Don't have either openjp2 or openjpeg libraries? Must error out.
- """
- with patch('glymur.lib.openjp2.OPENJP2', new=None):
- with patch('glymur.lib.openjpeg.OPENJPEG', new=None):
- with self.assertRaises(glymur.jp2k.LibraryNotFoundError):
- glymur.Jp2k(self.jp2file).read()
-
- def test_read_bands_without_library(self):
- """Don't have openjp2 library? Must error out.
- """
- with patch('glymur.lib.openjp2.OPENJP2', new=None):
- with patch('glymur.lib.openjpeg.OPENJPEG', new=None):
- with self.assertRaises(glymur.jp2k.LibraryNotFoundError):
- glymur.Jp2k(self.jp2file).read_bands()
-
- @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
- def test_write_without_library(self):
- """Don't have openjp2 library? Must error out.
- """
- data = glymur.Jp2k(self.j2kfile).read()
- with patch('glymur.lib.openjp2.OPENJP2', new=None):
- with patch('glymur.lib.openjpeg.OPENJPEG', new=None):
- with self.assertRaises(glymur.jp2k.LibraryNotFoundError):
- with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
- ofile = Jp2k(tfile.name, 'wb')
- ofile.write(data)
-
-
@unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
@unittest.skipIf(glymur.lib.openjp2.OPENJP2 is None,
"Missing openjp2 library.")
@@ -333,13 +292,10 @@ class TestJp2k(unittest.TestCase):
self.assertEqual(jp2k.box[2].box[1].colorspace, glymur.core.SRGB)
self.assertIsNone(jp2k.box[2].box[1].icc_profile)
- @unittest.skipIf(DATA_ROOT is None,
- "OPJ_DATA_ROOT environment variable not set")
def test_j2k_box(self):
"""A J2K/J2C file must not have any boxes."""
# Verify that a J2K file has no boxes.
- filename = os.path.join(DATA_ROOT, 'input/conformance/p0_01.j2k')
- jp2k = Jp2k(filename)
+ jp2k = Jp2k(self.j2kfile)
self.assertEqual(len(jp2k.box), 0)
@unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
@@ -412,6 +368,18 @@ class TestJp2k(unittest.TestCase):
self.assertEqual(new_jp2.box[j].length,
baseline_jp2.box[j].length)
+ def test_basic_jp2(self):
+ """Just a very basic test that reading a JP2 file does not error out.
+ """
+ j2k = Jp2k(self.jp2file)
+ j2k.read(rlevel=1)
+
+ def test_basic_j2k(self):
+ """Just a very basic test that reading a J2K file does not error out.
+ """
+ j2k = Jp2k(self.j2kfile)
+ j2k.read()
+
@unittest.skipIf(DATA_ROOT is None,
"OPJ_DATA_ROOT environment variable not set")
def test_read_differing_subsamples(self):
@@ -425,14 +393,11 @@ class TestJp2k(unittest.TestCase):
with self.assertRaises(RuntimeError):
j.read()
- @unittest.skipIf(DATA_ROOT is None,
- "OPJ_DATA_ROOT environment variable not set")
def test_empty_box_with_j2k(self):
"""Verify that the list of boxes in a J2C/J2K file is present, but
empty.
"""
- filename = os.path.join(DATA_ROOT, 'input/conformance/p0_05.j2k')
- j = Jp2k(filename)
+ j = Jp2k(self.j2kfile)
self.assertEqual(j.box, [])
@unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
@@ -820,6 +785,14 @@ class TestJp2k15(unittest.TestCase):
def tearDown(self):
pass
+ def test_rlevel_max(self):
+ """Verify that rlevel=-1 gets us the lowest resolution image"""
+ j = Jp2k(self.j2kfile)
+ thumbnail2 = j.read(rlevel=5)
+ thumbnail1 = j.read(rlevel=-1)
+ np.testing.assert_array_equal(thumbnail1, thumbnail2)
+ self.assertEqual(thumbnail1.shape, (25, 15, 3))
+
def test_area(self):
"""Area option not allowed for 1.5.1.
"""
@@ -841,6 +814,215 @@ class TestJp2k15(unittest.TestCase):
with self.assertRaises(TypeError):
j2k.read(layer=1)
+ def test_rlevel_too_high(self):
+ """Should error out appropriately if reduce level too high"""
+ j = Jp2k(self.jp2file)
+ with self.assertRaises(IOError):
+ j.read(rlevel=6)
+
+ def test_not_jpeg2000(self):
+ """Should error out appropriately if not given a JPEG 2000 file."""
+ filename = pkg_resources.resource_filename(glymur.__name__, "jp2k.py")
+ with self.assertRaises(IOError):
+ Jp2k(filename)
+
+ def test_file_not_present(self):
+ """Should error out if reading from a file that does not exist"""
+ # Verify that we error out appropriately if not given an existing file
+ # at all.
+ with self.assertRaises(OSError):
+ filename = 'this file does not actually exist on the file system.'
+ Jp2k(filename)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_write_with_jp2_in_caps(self):
+ """should be able to write with JP2 suffix."""
+ j2k = Jp2k(self.j2kfile)
+ expdata = j2k.read()
+ with tempfile.NamedTemporaryFile(suffix='.JP2') as tfile:
+ ofile = Jp2k(tfile.name, 'wb')
+ ofile.write(expdata)
+ actdata = ofile.read()
+ np.testing.assert_array_equal(actdata, expdata)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_write_srgb_without_mct(self):
+ """should be able to write RGB without specifying mct"""
+ j2k = Jp2k(self.j2kfile)
+ expdata = j2k.read()
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ ofile = Jp2k(tfile.name, 'wb')
+ ofile.write(expdata, mct=False)
+ actdata = ofile.read()
+ np.testing.assert_array_equal(actdata, expdata)
+
+ codestream = ofile.get_codestream()
+ self.assertEqual(codestream.segment[2].spcod[3], 0) # no mct
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_write_grayscale_with_mct(self):
+ """MCT usage makes no sense for grayscale images."""
+ j2k = Jp2k(self.j2kfile)
+ expdata = j2k.read()
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ ofile = Jp2k(tfile.name, 'wb')
+ with self.assertRaises(IOError):
+ ofile.write(expdata[:, :, 0], mct=True)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_write_cprl(self):
+ """Must be able to write a CPRL progression order file"""
+ # Issue 17
+ j = Jp2k(self.jp2file)
+ expdata = j.read(rlevel=1)
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ ofile = Jp2k(tfile.name, 'wb')
+ ofile.write(expdata, prog='CPRL')
+ actdata = ofile.read()
+ np.testing.assert_array_equal(actdata, expdata)
+
+ codestream = ofile.get_codestream()
+ self.assertEqual(codestream.segment[2].spcod[0], glymur.core.CPRL)
+
+ def test_jp2_boxes(self):
+ """Verify the boxes of a JP2 file. Basic jp2 test."""
+ jp2k = Jp2k(self.jp2file)
+
+ # top-level boxes
+ self.assertEqual(len(jp2k.box), 6)
+
+ self.assertEqual(jp2k.box[0].box_id, 'jP ')
+ self.assertEqual(jp2k.box[0].offset, 0)
+ self.assertEqual(jp2k.box[0].length, 12)
+ self.assertEqual(jp2k.box[0].longname, 'JPEG 2000 Signature')
+
+ self.assertEqual(jp2k.box[1].box_id, 'ftyp')
+ self.assertEqual(jp2k.box[1].offset, 12)
+ self.assertEqual(jp2k.box[1].length, 20)
+ self.assertEqual(jp2k.box[1].longname, 'File Type')
+
+ self.assertEqual(jp2k.box[2].box_id, 'jp2h')
+ self.assertEqual(jp2k.box[2].offset, 32)
+ self.assertEqual(jp2k.box[2].length, 45)
+ self.assertEqual(jp2k.box[2].longname, 'JP2 Header')
+
+ self.assertEqual(jp2k.box[3].box_id, 'uuid')
+ self.assertEqual(jp2k.box[3].offset, 77)
+ self.assertEqual(jp2k.box[3].length, 638)
+
+ self.assertEqual(jp2k.box[4].box_id, 'uuid')
+ self.assertEqual(jp2k.box[4].offset, 715)
+ self.assertEqual(jp2k.box[4].length, 2412)
+
+ self.assertEqual(jp2k.box[5].box_id, 'jp2c')
+ self.assertEqual(jp2k.box[5].offset, 3127)
+ self.assertEqual(jp2k.box[5].length, 1132296)
+
+ # jp2h super box
+ self.assertEqual(len(jp2k.box[2].box), 2)
+
+ self.assertEqual(jp2k.box[2].box[0].box_id, 'ihdr')
+ self.assertEqual(jp2k.box[2].box[0].offset, 40)
+ self.assertEqual(jp2k.box[2].box[0].length, 22)
+ self.assertEqual(jp2k.box[2].box[0].longname, 'Image Header')
+ self.assertEqual(jp2k.box[2].box[0].height, 1456)
+ self.assertEqual(jp2k.box[2].box[0].width, 2592)
+ self.assertEqual(jp2k.box[2].box[0].num_components, 3)
+ self.assertEqual(jp2k.box[2].box[0].bits_per_component, 8)
+ self.assertEqual(jp2k.box[2].box[0].signed, False)
+ self.assertEqual(jp2k.box[2].box[0].compression, 7)
+ self.assertEqual(jp2k.box[2].box[0].colorspace_unknown, False)
+ self.assertEqual(jp2k.box[2].box[0].ip_provided, False)
+
+ self.assertEqual(jp2k.box[2].box[1].box_id, 'colr')
+ self.assertEqual(jp2k.box[2].box[1].offset, 62)
+ self.assertEqual(jp2k.box[2].box[1].length, 15)
+ self.assertEqual(jp2k.box[2].box[1].longname, 'Colour Specification')
+ self.assertEqual(jp2k.box[2].box[1].precedence, 0)
+ self.assertEqual(jp2k.box[2].box[1].approximation, 0)
+ self.assertEqual(jp2k.box[2].box[1].colorspace, glymur.core.SRGB)
+ self.assertIsNone(jp2k.box[2].box[1].icc_profile)
+
+ def test_j2k_box(self):
+ """A J2K/J2C file must not have any boxes."""
+ # Verify that a J2K file has no boxes.
+ jp2k = Jp2k(self.j2kfile)
+ self.assertEqual(len(jp2k.box), 0)
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_64bit_xl_field(self):
+ """XL field should be supported"""
+ # Verify that boxes with the XL field are properly read.
+ # Don't have such a file on hand, so we create one. Copy our example
+ # file, but making the codestream have a 64-bit XL field.
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ with open(self.jp2file, 'rb') as ifile:
+ # Everything up until the jp2c box.
+ write_buffer = ifile.read(3127)
+ tfile.write(write_buffer)
+
+ # The L field must be 1 in order to signal the presence of the
+ # XL field. The actual length of the jp2c box increased by 8
+ # (8 bytes for the XL field).
+ length = 1
+ typ = b'jp2c'
+ xlen = 1133427 + 8
+ write_buffer = struct.pack('>I4sQ', int(length), typ, xlen)
+ tfile.write(write_buffer)
+
+ # Get the rest of the input file (minus the 8 bytes for L and
+ # T.
+ ifile.seek(8, 1)
+ write_buffer = ifile.read()
+ tfile.write(write_buffer)
+ tfile.flush()
+
+ jp2k = Jp2k(tfile.name)
+
+ self.assertEqual(jp2k.box[5].box_id, 'jp2c')
+ self.assertEqual(jp2k.box[5].offset, 3127)
+ self.assertEqual(jp2k.box[5].length, 1133427 + 8)
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_length_field_is_zero(self):
+ """L=0 (length field in box header) is allowed"""
+ # Verify that boxes with the L field as zero are correctly read.
+ # This should only happen in the last box of a JPEG 2000 file.
+ # Our example image has its last box at byte 588458.
+ baseline_jp2 = Jp2k(self.jp2file)
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ with open(self.jp2file, 'rb') as ifile:
+ # Everything up until the jp2c box.
+ write_buffer = ifile.read(588458)
+ tfile.write(write_buffer)
+
+ length = 0
+ typ = b'uuid'
+ write_buffer = struct.pack('>I4s', int(length), typ)
+ tfile.write(write_buffer)
+
+ # Get the rest of the input file (minus the 8 bytes for L and
+ # T.
+ ifile.seek(8, 1)
+ write_buffer = ifile.read()
+ tfile.write(write_buffer)
+ tfile.flush()
+
+ new_jp2 = Jp2k(tfile.name)
+
+ # The top level boxes in each file should match.
+ for j in range(len(baseline_jp2.box)):
+ self.assertEqual(new_jp2.box[j].box_id,
+ baseline_jp2.box[j].box_id)
+ self.assertEqual(new_jp2.box[j].offset,
+ baseline_jp2.box[j].offset)
+ self.assertEqual(new_jp2.box[j].length,
+ baseline_jp2.box[j].length)
+
def test_basic_jp2(self):
"""This test is only useful when openjp2 is not available
and OPJ_DATA_ROOT is not set. We need at least one
@@ -857,6 +1039,393 @@ class TestJp2k15(unittest.TestCase):
j2k = Jp2k(self.j2kfile)
j2k.read()
+ @unittest.skipIf(DATA_ROOT is None,
+ "OPJ_DATA_ROOT environment variable not set")
+ def test_read_differing_subsamples(self):
+ """should error out with read used on differently subsampled images"""
+ # Verify that we error out appropriately if we use the read method
+ # on an image with differing subsamples
+ #
+ # Issue 86.
+ filename = os.path.join(DATA_ROOT, 'input/conformance/p0_05.j2k')
+ j = Jp2k(filename)
+ with self.assertRaises(RuntimeError):
+ j.read()
+
+ def test_empty_box_with_j2k(self):
+ """Verify that the list of boxes in a J2C/J2K file is present, but
+ empty.
+ """
+ j = Jp2k(self.j2kfile)
+ self.assertEqual(j.box, [])
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_cblkh_different_than_width(self):
+ """Verify that we can set a code block size where height does not equal
+ width.
+ """
+ data = np.zeros((128, 128), dtype=np.uint8)
+ with tempfile.NamedTemporaryFile(suffix='.j2k') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+
+ # The code block dimensions are given as rows x columns.
+ j.write(data, cbsize=(16, 32))
+
+ codestream = j.get_codestream()
+
+ # Code block size is reported as XY in the codestream.
+ self.assertEqual(tuple(codestream.segment[2].spcod[5:7]), (3, 2))
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_too_many_dimensions(self):
+ """OpenJP2 only allows 2D or 3D images."""
+ with tempfile.NamedTemporaryFile(suffix='.j2k') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ with self.assertRaises(IOError):
+ data = np.zeros((128, 128, 2, 2), dtype=np.uint8)
+ j.write(data)
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_unrecognized_jp2_clrspace(self):
+ """We only allow RGB and GRAYSCALE. Should error out with others"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ with self.assertRaises(IOError):
+ data = np.zeros((128, 128, 3), dtype=np.uint8)
+ j.write(data, colorspace='cmyk')
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_2d_rgb(self):
+ """RGB must have at least 3 components."""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ with self.assertRaises(IOError):
+ data = np.zeros((128, 128, 2), dtype=np.uint8)
+ j.write(data, colorspace='rgb')
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_colorspace_with_j2k(self):
+ """Specifying a colorspace with J2K does not make sense"""
+ with tempfile.NamedTemporaryFile(suffix='.j2k') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ with self.assertRaises(IOError):
+ data = np.zeros((128, 128, 3), dtype=np.uint8)
+ j.write(data, colorspace='rgb')
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_specify_rgb(self):
+ """specify RGB explicitly"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128, 3), dtype=np.uint8)
+ j.write(data, colorspace='rgb')
+ self.assertEqual(j.box[2].box[1].colorspace, glymur.core.SRGB)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_specify_gray(self):
+ """test gray explicitly specified (that's GRAY, not GREY)"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128), dtype=np.uint8)
+ j.write(data, colorspace='gray')
+ self.assertEqual(j.box[2].box[1].colorspace,
+ glymur.core.GREYSCALE)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_specify_grey(self):
+ """test grey explicitly specified"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128), dtype=np.uint8)
+ j.write(data, colorspace='grey')
+ self.assertEqual(j.box[2].box[1].colorspace,
+ glymur.core.GREYSCALE)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_grey_with_extra_component(self):
+ """version 2.0 cannot write gray + extra"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128, 2), dtype=np.uint8)
+ j.write(data)
+ self.assertEqual(j.box[2].box[0].height, 128)
+ self.assertEqual(j.box[2].box[0].width, 128)
+ self.assertEqual(j.box[2].box[0].num_components, 2)
+ self.assertEqual(j.box[2].box[1].colorspace,
+ glymur.core.GREYSCALE)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_grey_with_two_extra_comps(self):
+ """should be able to write gray + two extra components"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128, 3), dtype=np.uint8)
+ j.write(data, colorspace='gray')
+ self.assertEqual(j.box[2].box[0].height, 128)
+ self.assertEqual(j.box[2].box[0].width, 128)
+ self.assertEqual(j.box[2].box[0].num_components, 3)
+ self.assertEqual(j.box[2].box[1].colorspace,
+ glymur.core.GREYSCALE)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_rgb_with_extra_component(self):
+ """v2.0+ should be able to write extra components"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128, 4), dtype=np.uint8)
+ j.write(data)
+ self.assertEqual(j.box[2].box[0].height, 128)
+ self.assertEqual(j.box[2].box[0].width, 128)
+ self.assertEqual(j.box[2].box[0].num_components, 4)
+ self.assertEqual(j.box[2].box[1].colorspace, glymur.core.SRGB)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_extra_components_on_v2(self):
+ """must error out in 1.x with extra components."""
+ # Extra components seems to require 2.0+. Verify that we error out.
+ with self.assertRaises(IOError):
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ data = np.zeros((128, 128, 4), dtype=np.uint8)
+ j.write(data)
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ def test_specify_ycc(self):
+ """Should reject YCC"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ with self.assertRaises(IOError):
+ data = np.zeros((128, 128, 3), dtype=np.uint8)
+ j.write(data, colorspace='ycc')
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_uinf_ulst_url_boxes(self):
+ """Verify that we can read UINF, ULST, and URL boxes"""
+ # Verify that we can read UINF, ULST, and URL boxes. I don't have
+ # easy access to such a file, and there's no such file in the
+ # openjpeg repository, so I'll fake one.
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ with open(self.jp2file, 'rb') as ifile:
+ # Everything up until the jp2c box.
+ write_buffer = ifile.read(77)
+ tfile.write(write_buffer)
+
+ # Write the UINF superbox
+ # Length = 50, id is uinf.
+ write_buffer = struct.pack('>I4s', int(50), b'uinf')
+ tfile.write(write_buffer)
+
+ # Write the ULST box.
+ # Length is 26, 1 UUID, hard code that UUID as zeros.
+ write_buffer = struct.pack('>I4sHIIII', int(26), b'ulst',
+ int(1), int(0), int(0), int(0),
+ int(0))
+ tfile.write(write_buffer)
+
+ # Write the URL box.
+ # Length is 16, version is one byte, flag is 3 bytes, url
+ # is the rest.
+ write_buffer = struct.pack('>I4sBBBB',
+ int(16), b'url ',
+ int(0), int(0), int(0), int(0))
+ tfile.write(write_buffer)
+ write_buffer = struct.pack('>ssss', b'a', b'b', b'c', b'd')
+ tfile.write(write_buffer)
+
+ # Get the rest of the input file.
+ write_buffer = ifile.read()
+ tfile.write(write_buffer)
+ tfile.flush()
+
+ jp2k = Jp2k(tfile.name)
+
+ self.assertEqual(jp2k.box[3].box_id, 'uinf')
+ self.assertEqual(jp2k.box[3].offset, 77)
+ self.assertEqual(jp2k.box[3].length, 50)
+
+ self.assertEqual(jp2k.box[3].box[0].box_id, 'ulst')
+ self.assertEqual(jp2k.box[3].box[0].offset, 85)
+ self.assertEqual(jp2k.box[3].box[0].length, 26)
+ ulst = []
+ ulst.append(uuid.UUID('00000000-0000-0000-0000-000000000000'))
+ self.assertEqual(jp2k.box[3].box[0].ulst, ulst)
+
+ self.assertEqual(jp2k.box[3].box[1].box_id, 'url ')
+ self.assertEqual(jp2k.box[3].box[1].offset, 111)
+ self.assertEqual(jp2k.box[3].box[1].length, 16)
+ self.assertEqual(jp2k.box[3].box[1].version, 0)
+ self.assertEqual(jp2k.box[3].box[1].flag, (0, 0, 0))
+ self.assertEqual(jp2k.box[3].box[1].url, 'abcd')
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_xml_with_trailing_nulls(self):
+ """ElementTree doesn't like trailing null chars after valid XML text"""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ with open(self.jp2file, 'rb') as ifile:
+ # Everything up until the jp2c box.
+ write_buffer = ifile.read(77)
+ tfile.write(write_buffer)
+
+ # Write the xml box
+ # Length = 36, id is 'xml '.
+ write_buffer = struct.pack('>I4s', int(36), b'xml ')
+ tfile.write(write_buffer)
+
+ write_buffer = 'this is a test' + chr(0)
+ write_buffer = write_buffer.encode()
+ tfile.write(write_buffer)
+
+ # Get the rest of the input file.
+ write_buffer = ifile.read()
+ tfile.write(write_buffer)
+ tfile.flush()
+
+ jp2k = Jp2k(tfile.name)
+
+ self.assertEqual(jp2k.box[3].box_id, 'xml ')
+ self.assertEqual(jp2k.box[3].offset, 77)
+ self.assertEqual(jp2k.box[3].length, 36)
+ self.assertEqual(ET.tostring(jp2k.box[3].xml.getroot()),
+ b'this is a test')
+
+ @unittest.skip("Writing requires openjp2 library at the moment.")
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_asoc_label_box(self):
+ """Test asoc and label box"""
+ # Construct a fake file with an asoc and a label box, as
+ # OpenJPEG doesn't have such a file.
+ data = Jp2k(self.jp2file).read(rlevel=1)
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ j = Jp2k(tfile.name, 'wb')
+ j.write(data)
+
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile2:
+
+ # Offset of the codestream is where we start.
+ read_buffer = tfile.read(77)
+ tfile2.write(read_buffer)
+
+ # read the rest of the file, it's the codestream.
+ codestream = tfile.read()
+
+ # Write the asoc superbox.
+ # Length = 36, id is 'asoc'.
+ write_buffer = struct.pack('>I4s', int(56), b'asoc')
+ tfile2.write(write_buffer)
+
+ # Write the contained label box
+ write_buffer = struct.pack('>I4s', int(13), b'lbl ')
+ tfile2.write(write_buffer)
+ tfile2.write('label'.encode())
+
+ # Write the xml box
+ # Length = 36, id is 'xml '.
+ write_buffer = struct.pack('>I4s', int(35), b'xml ')
+ tfile2.write(write_buffer)
+
+ write_buffer = 'this is a test'
+ write_buffer = write_buffer.encode()
+ tfile2.write(write_buffer)
+
+ # Now append the codestream.
+ tfile2.write(codestream)
+ tfile2.flush()
+
+ jasoc = Jp2k(tfile2.name)
+ self.assertEqual(jasoc.box[3].box_id, 'asoc')
+ self.assertEqual(jasoc.box[3].box[0].box_id, 'lbl ')
+ self.assertEqual(jasoc.box[3].box[0].label, 'label')
+ self.assertEqual(jasoc.box[3].box[1].box_id, 'xml ')
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ @unittest.skipIf(re.match('1\.[345]\.\d', OPENJPEG_VERSION) is not None,
+ "Segfault on official v1.x series.")
+ def test_openjpeg_library_message(self):
+ """Verify the error message produced by the openjpeg library"""
+ # This will confirm that the error callback mechanism is working.
+ with open(self.jp2file, 'rb') as fptr:
+ data = fptr.read()
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ # Codestream starts at byte 3127. SIZ marker at 3137.
+ # COD marker at 3186. Subsampling at 3180.
+ tfile.write(data[0:3179])
+
+ # Make the DY bytes of the SIZ segment zero. That means that
+ # a subsampling factor is zero, which is illegal.
+ tfile.write(b'\x00')
+ tfile.write(data[3180:3182])
+ tfile.write(b'\x00')
+ tfile.write(data[3184:3186])
+ tfile.write(b'\x00')
+
+ tfile.write(data[3186:])
+ tfile.flush()
+ with warnings.catch_warnings():
+ warnings.simplefilter("ignore")
+ j = Jp2k(tfile.name)
+ regexp = re.compile(r'''OpenJPEG\slibrary\serror:\s+
+ Invalid\svalues\sfor\scomp\s=\s0\s+
+ :\sdx=1\sdy=0''', re.VERBOSE)
+ if sys.hexversion < 0x03020000:
+ with self.assertRaisesRegexp((IOError, OSError), regexp):
+ j.read(rlevel=1)
+ else:
+ with self.assertRaisesRegex((IOError, OSError), regexp):
+ j.read(rlevel=1)
+
+ def test_xmp_attribute(self):
+ """Verify the XMP packet in the shipping example file can be read."""
+ j = Jp2k(self.jp2file)
+ xmp = j.box[4].data
+ ns0 = '{http://www.w3.org/1999/02/22-rdf-syntax-ns#}'
+ ns1 = '{http://ns.adobe.com/xap/1.0/}'
+ name = '{0}RDF/{0}Description'.format(ns0)
+ elt = xmp.find(name)
+ attr_value = elt.attrib['{0}CreatorTool'.format(ns1)]
+ self.assertEqual(attr_value, 'glymur')
+
+ @unittest.skipIf(os.name == "nt", "NamedTemporaryFile issue on windows")
+ def test_unrecognized_exif_tag(self):
+ """An unrecognized exif tag should be handled gracefully."""
+ with tempfile.NamedTemporaryFile(suffix='.jp2') as tfile:
+ shutil.copyfile(self.jp2file, tfile.name)
+
+ # The Exif UUID starts at byte 77. There are 8 bytes for the L and
+ # T fields, then 16 bytes for the UUID identifier, then 6 exif
+ # header bytes, then 8 bytes for the TIFF header, then 2 bytes
+ # the the Image IFD number of tags, where we finally find the first
+ # tag, "Make" (271). We'll corrupt it by changing it into 171,
+ # which does not correspond to any known Exif Image tag.
+ with open(tfile.name, 'r+b') as fptr:
+ fptr.seek(117)
+ write_buffer = struct.pack('