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1 commit
| Author | SHA1 | Date | |
|---|---|---|---|
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b754267923 |
1 changed files with 128 additions and 143 deletions
271
glymur/jp2k.py
271
glymur/jp2k.py
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@ -45,6 +45,11 @@ JP2_IDS = ['colr', 'cdef', 'cmap', 'jp2c', 'ftyp', 'ihdr', 'jp2h', 'jP ',
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'uuid']
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'uuid']
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JPX_IDS = ['asoc', 'nlst']
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JPX_IDS = ['asoc', 'nlst']
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_COLORSPACE_MAP = {'rgb': opj2.CLRSPC_SRGB,
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'gray': opj2.CLRSPC_GRAY,
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'grey': opj2.CLRSPC_GRAY,
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'ycc': opj2.CLRSPC_YCC}
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class Jp2k(Jp2kBox):
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class Jp2k(Jp2kBox):
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"""JPEG 2000 file.
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"""JPEG 2000 file.
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@ -74,6 +79,7 @@ class Jp2k(Jp2kBox):
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self.mode = mode
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self.mode = mode
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self.box = []
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self.box = []
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self._codec_format = None
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self._codec_format = None
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self._colorspace = None
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# Parse the file for JP2/JPX contents only if we are reading it.
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# Parse the file for JP2/JPX contents only if we are reading it.
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if mode == 'rb':
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if mode == 'rb':
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@ -338,27 +344,18 @@ class Jp2k(Jp2kBox):
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return cparams
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return cparams
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def _process_write_inputs(self, img_array, colorspace=None, **kwargs):
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def _process_write_inputs(self, img_array, **kwargs):
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"""Directs processing of write method arguments.
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"""Directs processing of write method arguments.
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It's somewhat awkward to process all the kwargs arguments at once.
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The "colorspace" is not a parameter that gets processed into the
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compression parameters structure, and it unfortunately must be handled
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in the middle of the compression parameter processing.
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Parameters
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Parameters
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----------
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----------
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img_array : ndarray
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img_array : ndarray
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Image data to be written to file.
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Image data to be written to file.
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colorspace : str, optional
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Either 'rgb' or 'gray'.
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Returns
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Returns
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-------
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-------
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cparams : CompressionParametersType(ctypes.Structure)
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cparams : CompressionParametersType(ctypes.Structure)
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Corresponds to cparameters_t type in openjp2 headers.
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Corresponds to cparameters_t type in openjp2 headers.
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colorspace : int
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Either CLRSPC_SRGB or CLRSPC_GRAY
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"""
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"""
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if (('cinema2k' in kwargs or 'cinema4k' in kwargs) and
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if (('cinema2k' in kwargs or 'cinema4k' in kwargs) and
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(len(set(kwargs)) > 1)):
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(len(set(kwargs)) > 1)):
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@ -370,13 +367,11 @@ class Jp2k(Jp2kBox):
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raise IOError(msg)
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raise IOError(msg)
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cparams = self._populate_cparams(**kwargs)
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cparams = self._populate_cparams(**kwargs)
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_validate_compression_params(img_array, cparams)
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self._validate_compression_params(img_array, cparams, **kwargs)
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colorspace = _unpack_colorspace(colorspace, img_array, cparams)
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try:
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try:
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mct = kwargs['mct']
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mct = kwargs['mct']
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if mct and colorspace == opj2.CLRSPC_GRAY:
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if mct and self._colorspace == opj2.CLRSPC_GRAY:
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# Cannot check for this in the validate routine, as we need
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# Cannot check for this in the validate routine, as we need
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# to know what the target colorspace has been determined to be.
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# to know what the target colorspace has been determined to be.
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msg = "Cannot specify usage of the multi component transform "
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msg = "Cannot specify usage of the multi component transform "
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@ -386,12 +381,12 @@ class Jp2k(Jp2kBox):
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except KeyError:
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except KeyError:
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# If the multi component transform was not specified, we infer
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# If the multi component transform was not specified, we infer
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# that it should be used if the color space is RGB.
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# that it should be used if the color space is RGB.
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if colorspace == opj2.CLRSPC_SRGB:
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if self._colorspace == opj2.CLRSPC_SRGB:
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cparams.tcp_mct = 1
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cparams.tcp_mct = 1
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else:
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else:
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cparams.tcp_mct = 0
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cparams.tcp_mct = 0
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return cparams, colorspace
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return cparams
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def write(self, img_array, verbose=False, **kwargs):
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def write(self, img_array, verbose=False, **kwargs):
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"""Write image data to a JP2/JPX/J2k file. Intended usage of the
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"""Write image data to a JP2/JPX/J2k file. Intended usage of the
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@ -466,21 +461,23 @@ class Jp2k(Jp2kBox):
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glymur.LibraryNotFoundError
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glymur.LibraryNotFoundError
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If glymur is unable to load the openjp2 library.
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If glymur is unable to load the openjp2 library.
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"""
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"""
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if opj2.OPENJP2 is not None:
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if opj2.OPENJP2 is None and opj.OPENJPEG is None:
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self._write_openjp2(img_array, verbose=verbose, **kwargs)
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elif opj.OPENJPEG is not None:
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self._write_openjpeg(img_array, verbose=verbose, **kwargs)
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else:
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raise LibraryNotFoundError("You must have at least version 1.5 of "
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raise LibraryNotFoundError("You must have at least version 1.5 of "
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"OpenJPEG before using this "
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"OpenJPEG before using this "
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"functionality.")
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"functionality.")
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def _write_openjpeg(self, img_array, verbose=False, **kwargs):
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self._determine_colorspace(img_array, **kwargs)
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cparams = self._process_write_inputs(img_array, **kwargs)
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if opj2.OPENJP2 is not None:
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self._write_openjp2(img_array, cparams, verbose=verbose)
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else:
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self._write_openjpeg(img_array, cparams, verbose=verbose)
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def _write_openjpeg(self, img_array, cparams, verbose=False):
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"""
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"""
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Write JPEG 2000 file using OpenJPEG 1.5 interface.
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Write JPEG 2000 file using OpenJPEG 1.5 interface.
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"""
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"""
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cparams, colorspace = self._process_write_inputs(img_array, **kwargs)
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if img_array.ndim == 2:
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if img_array.ndim == 2:
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# Force the image to be 3D. Just makes things easier later on.
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# Force the image to be 3D. Just makes things easier later on.
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img_array = img_array.reshape(img_array.shape[0],
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img_array = img_array.reshape(img_array.shape[0],
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@ -490,7 +487,7 @@ class Jp2k(Jp2kBox):
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comptparms = _populate_comptparms(img_array, cparams)
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comptparms = _populate_comptparms(img_array, cparams)
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with ExitStack() as stack:
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with ExitStack() as stack:
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image = opj.image_create(comptparms, colorspace)
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image = opj.image_create(comptparms, self._colorspace)
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stack.callback(opj.image_destroy, image)
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stack.callback(opj.image_destroy, image)
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numrows, numcols, numlayers = img_array.shape
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numrows, numcols, numlayers = img_array.shape
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@ -542,13 +539,114 @@ class Jp2k(Jp2kBox):
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self.parse()
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self.parse()
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def _validate_compression_params(self, img_array, cparams, **kwargs):
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"""Check that the compression parameters are valid.
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def _write_openjp2(self, img_array, verbose=False, **kwargs):
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Parameters
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----------
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img_array : ndarray
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Image data to be written to file.
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cparams : CompressionParametersType(ctypes.Structure)
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Corresponds to cparameters_t type in openjp2 headers.
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"""
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"""
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Write JPEG 2000 file using OpenJPEG 2.0 interface.
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# Cannot specify a colorspace with J2K.
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"""
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if cparams.codec_fmt == opj2.CODEC_J2K and 'colorspace' in kwargs:
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cparams, colorspace = self._process_write_inputs(img_array, **kwargs)
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msg = 'Do not specify a colorspace when writing a raw '
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msg += 'codestream.'
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raise IOError(msg)
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# Code block size
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code_block_specified = False
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if cparams.cblockw_init != 0 and cparams.cblockh_init != 0:
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# These fields ARE zero if uninitialized.
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width = cparams.cblockw_init
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height = cparams.cblockh_init
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code_block_specified = True
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if height * width > 4096 or height < 4 or width < 4:
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msg = "Code block area cannot exceed 4096. "
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msg += "Code block height and width must be larger than 4."
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raise IOError(msg)
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if ((math.log(height, 2) != math.floor(math.log(height, 2)) or
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math.log(width, 2) != math.floor(math.log(width, 2)))):
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msg = "Bad code block size ({0}, {1}), "
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msg += "must be powers of 2."
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raise IOError(msg.format(height, width))
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# Precinct size
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if cparams.res_spec != 0:
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# precinct size was not specified if this field is zero.
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for j in range(cparams.res_spec):
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prch = cparams.prch_init[j]
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prcw = cparams.prcw_init[j]
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if j == 0 and code_block_specified:
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height, width = cparams.cblockh_init, cparams.cblockw_init
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if height * 2 > prch or width * 2 > prcw:
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msg = "Highest Resolution precinct size must be at "
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msg += "least twice that of the code block dimensions."
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raise IOError(msg)
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if ((math.log(prch, 2) != math.floor(math.log(prch, 2)) or
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math.log(prcw, 2) != math.floor(math.log(prcw, 2)))):
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msg = "Bad precinct sizes ({0}, {1}), "
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msg += "must be powers of 2."
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raise IOError(msg.format(prch, prcw))
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# What would the point of 1D images be?
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if img_array.ndim == 1 or img_array.ndim > 3:
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msg = "{0}D imagery is not allowed.".format(img_array.ndim)
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raise IOError(msg)
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if re.match("2.0.0", version.openjpeg_version) is not None:
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if (((img_array.ndim != 2) and
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(img_array.shape[2] != 1 and img_array.shape[2] != 3))):
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msg = "Writing images is restricted to single-channel "
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msg += "greyscale images or three-channel RGB images when "
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msg += "the OpenJPEG library version is the official 2.0.0 "
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msg += "release."
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raise IOError(msg)
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if img_array.dtype != np.uint8 and img_array.dtype != np.uint16:
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msg = "Only uint8 and uint16 images are currently supported."
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raise RuntimeError(msg)
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def _determine_colorspace(self, img_array, colorspace=None, **kwargs):
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"""Determine the colorspace from the supplied inputs.
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Parameters
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----------
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img_array : ndarray
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Image data to be written to file.
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colorspace : str, optional
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Either 'rgb' or 'gray'.
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"""
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if colorspace is None:
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# Must infer the colorspace from the image dimensions.
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if img_array.ndim < 3:
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# A single channel image is grayscale.
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self._colorspace = opj2.CLRSPC_GRAY
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elif img_array.shape[2] == 1 or img_array.shape[2] == 2:
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# A single channel image or an image with two channels is going
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# to be greyscale.
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self._colorspace = opj2.CLRSPC_GRAY
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else:
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# Anything else must be RGB, right?
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self._colorspace = opj2.CLRSPC_SRGB
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else:
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if colorspace.lower() not in ('rgb', 'grey', 'gray'):
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msg = 'Invalid colorspace "{0}"'.format(colorspace)
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raise IOError(msg)
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elif colorspace.lower() == 'rgb' and img_array.shape[2] < 3:
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msg = 'RGB colorspace requires at least 3 components.'
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raise IOError(msg)
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# Turn the colorspace from a string to the enumerated value that
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# the library expects.
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self._colorspace = _COLORSPACE_MAP[colorspace.lower()]
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def _write_openjp2(self, img_array, cparams, verbose=False):
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"""
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Write JPEG 2000 file using OpenJPEG 2.x interface.
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"""
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if img_array.ndim == 2:
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if img_array.ndim == 2:
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# Force the image to be 3D. Just makes things easier later on.
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# Force the image to be 3D. Just makes things easier later on.
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numrows, numcols = img_array.shape
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numrows, numcols = img_array.shape
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@ -557,7 +655,7 @@ class Jp2k(Jp2kBox):
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comptparms = _populate_comptparms(img_array, cparams)
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comptparms = _populate_comptparms(img_array, cparams)
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with ExitStack() as stack:
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with ExitStack() as stack:
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image = opj2.image_create(comptparms, colorspace)
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image = opj2.image_create(comptparms, self._colorspace)
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stack.callback(opj2.image_destroy, image)
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stack.callback(opj2.image_destroy, image)
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_populate_image_struct(cparams, image, img_array)
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_populate_image_struct(cparams, image, img_array)
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@ -1674,50 +1772,6 @@ def extract_image_bands(image):
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return data
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return data
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def _unpack_colorspace(colorspace, img_array, cparams):
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"""Determine the colorspace from the supplied inputs.
|
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Parameters
|
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----------
|
|
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colorspace : int
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Either CLRSPC_SRGB or CLRSPC_GRAY
|
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img_array : ndarray
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Image data to be written to file.
|
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cparams : CompressionParametersType(ctypes.Structure)
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Corresponds to cparameters_t type in openjp2 headers.
|
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"""
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if colorspace is None:
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# Must infer the colorspace from the image dimensions.
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if img_array.ndim < 3:
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# A single channel image is grayscale.
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colorspace = opj2.CLRSPC_GRAY
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elif img_array.shape[2] == 1 or img_array.shape[2] == 2:
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# A single channel image or an image with two channels is going
|
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# to be greyscale.
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colorspace = opj2.CLRSPC_GRAY
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else:
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# Anything else must be RGB, right?
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colorspace = opj2.CLRSPC_SRGB
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else:
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# Supplied a string colorspace, so we must validate it.
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if cparams.codec_fmt == opj2.CODEC_J2K:
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msg = 'Do not specify a colorspace when writing a raw '
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msg += 'codestream.'
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raise IOError(msg)
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|
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if colorspace.lower() not in ('rgb', 'grey', 'gray'):
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msg = 'Invalid colorspace "{0}"'.format(colorspace)
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raise IOError(msg)
|
|
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elif colorspace.lower() == 'rgb' and img_array.shape[2] < 3:
|
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msg = 'RGB colorspace requires at least 3 components.'
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raise IOError(msg)
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|
|
||||||
# Turn the colorspace from a string to the enumerated value that
|
|
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# the library expects.
|
|
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colorspace = _COLORSPACE_MAP[colorspace.lower()]
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|
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return colorspace
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|
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|
|
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def _populate_comptparms(img_array, cparams):
|
def _populate_comptparms(img_array, cparams):
|
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"""Instantiate and populate comptparms structure.
|
"""Instantiate and populate comptparms structure.
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|
|
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@ -1805,75 +1859,6 @@ def _populate_image_struct(cparams, image, imgdata):
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return image
|
return image
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|
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|
|
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def _validate_compression_params(img_array, cparams):
|
|
||||||
"""Check that the compression parameters are valid.
|
|
||||||
|
|
||||||
Parameters
|
|
||||||
----------
|
|
||||||
img_array : ndarray
|
|
||||||
Image data to be written to file.
|
|
||||||
cparams : CompressionParametersType(ctypes.Structure)
|
|
||||||
Corresponds to cparameters_t type in openjp2 headers.
|
|
||||||
"""
|
|
||||||
|
|
||||||
# Code block size
|
|
||||||
code_block_specified = False
|
|
||||||
if cparams.cblockw_init != 0 and cparams.cblockh_init != 0:
|
|
||||||
# These fields ARE zero if uninitialized.
|
|
||||||
width = cparams.cblockw_init
|
|
||||||
height = cparams.cblockh_init
|
|
||||||
code_block_specified = True
|
|
||||||
if height * width > 4096 or height < 4 or width < 4:
|
|
||||||
msg = "Code block area cannot exceed 4096. "
|
|
||||||
msg += "Code block height and width must be larger than 4."
|
|
||||||
raise IOError(msg)
|
|
||||||
if ((math.log(height, 2) != math.floor(math.log(height, 2)) or
|
|
||||||
math.log(width, 2) != math.floor(math.log(width, 2)))):
|
|
||||||
msg = "Bad code block size ({0}, {1}), "
|
|
||||||
msg += "must be powers of 2."
|
|
||||||
raise IOError(msg.format(height, width))
|
|
||||||
|
|
||||||
# Precinct size
|
|
||||||
if cparams.res_spec != 0:
|
|
||||||
# precinct size was not specified if this field is zero.
|
|
||||||
for j in range(cparams.res_spec):
|
|
||||||
prch = cparams.prch_init[j]
|
|
||||||
prcw = cparams.prcw_init[j]
|
|
||||||
if j == 0 and code_block_specified:
|
|
||||||
height, width = cparams.cblockh_init, cparams.cblockw_init
|
|
||||||
if height * 2 > prch or width * 2 > prcw:
|
|
||||||
msg = "Highest Resolution precinct size must be at "
|
|
||||||
msg += "least twice that of the code block dimensions."
|
|
||||||
raise IOError(msg)
|
|
||||||
if ((math.log(prch, 2) != math.floor(math.log(prch, 2)) or
|
|
||||||
math.log(prcw, 2) != math.floor(math.log(prcw, 2)))):
|
|
||||||
msg = "Bad precinct sizes ({0}, {1}), "
|
|
||||||
msg += "must be powers of 2."
|
|
||||||
raise IOError(msg.format(prch, prcw))
|
|
||||||
|
|
||||||
# What would the point of 1D images be?
|
|
||||||
if img_array.ndim == 1 or img_array.ndim > 3:
|
|
||||||
msg = "{0}D imagery is not allowed.".format(img_array.ndim)
|
|
||||||
raise IOError(msg)
|
|
||||||
|
|
||||||
if re.match("2.0.0", version.openjpeg_version) is not None:
|
|
||||||
if (((img_array.ndim != 2) and
|
|
||||||
(img_array.shape[2] != 1 and img_array.shape[2] != 3))):
|
|
||||||
msg = "Writing images is restricted to single-channel "
|
|
||||||
msg += "greyscale images or three-channel RGB images when "
|
|
||||||
msg += "the OpenJPEG library version is the official 2.0.0 "
|
|
||||||
msg += "release."
|
|
||||||
raise IOError(msg)
|
|
||||||
|
|
||||||
if img_array.dtype != np.uint8 and img_array.dtype != np.uint16:
|
|
||||||
msg = "Only uint8 and uint16 images are currently supported."
|
|
||||||
raise RuntimeError(msg)
|
|
||||||
|
|
||||||
_COLORSPACE_MAP = {'rgb': opj2.CLRSPC_SRGB,
|
|
||||||
'gray': opj2.CLRSPC_GRAY,
|
|
||||||
'grey': opj2.CLRSPC_GRAY,
|
|
||||||
'ycc': opj2.CLRSPC_YCC}
|
|
||||||
|
|
||||||
# Setup the default callback handlers. See the callback functions subsection
|
# Setup the default callback handlers. See the callback functions subsection
|
||||||
# in the ctypes section of the Python documentation for a solid explanation of
|
# in the ctypes section of the Python documentation for a solid explanation of
|
||||||
# what's going on here.
|
# what's going on here.
|
||||||
|
|
|
||||||
Loading…
Add table
Add a link
Reference in a new issue