git-svn-id: https://swig.svn.sourceforge.net/svnroot/swig/trunk/SWIG@9175 626c5289-ae23-0410-ae9c-e8d60b6d4f22
91 lines
2.7 KiB
HTML
91 lines
2.7 KiB
HTML
<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
|
|
<html>
|
|
<head>
|
|
<title>SWIG and R</title>
|
|
<link rel="stylesheet" type="text/css" href="style.css">
|
|
</head>
|
|
|
|
<body bgcolor="#ffffff">
|
|
<H1>SWIG and R</H1>
|
|
|
|
<p>
|
|
R is a GPL'ed open source statistical and plotting environment.
|
|
Information about R can be found at <a
|
|
href="http://www.r-project.org/">www.r-project.org</a>.
|
|
|
|
The R binding are under active development and are extremely
|
|
experimental. Not all features have been implemented and the API is
|
|
not stable.
|
|
</p>
|
|
|
|
<H2>Bugs</H2>
|
|
<p>
|
|
Currently the following features are not implemented or broken:
|
|
<ul>
|
|
<li>Garbage collection of created objects
|
|
<li>C Array wrappings
|
|
<li>tested on UNIX only, how well or badly it works on windows is not known
|
|
</ul>
|
|
|
|
<H2>Using R and SWIG</H2>
|
|
|
|
<p>
|
|
To use R and SWIG in C mode, execute the following commands where
|
|
example_func.c is the name of the file with the functions in them
|
|
<div class="shell">
|
|
<pre>
|
|
swig -r -o example,c example.i
|
|
PKG_LIBS="example_func.c" R CMD SHLIB example.c
|
|
</pre>
|
|
</div>
|
|
|
|
The corresponding comments for C++ mode are
|
|
<div class="shell">
|
|
<pre>
|
|
swig -c++ -r -o example.cpp example.i
|
|
PKG_LIBS="example_func.cxx" R CMD SHLIB example.cpp
|
|
</pre>
|
|
</div>
|
|
|
|
Note that R is sensitive to the name of the file and to the file
|
|
extension in C and C++ mode. The name of the wrapper file must be the
|
|
name of the library. Also in C++ mode, the file extension must be cpp
|
|
rather than cxx for the R compile command to recognize it.
|
|
</p>
|
|
|
|
<p>
|
|
The commands produce two files. A dynamic shared object file called
|
|
example.so and an R wrapper file called example_wrap.S. To load these
|
|
files, start up R and type in the following commands
|
|
<div class="shell">
|
|
<pre>
|
|
dyn.load('example.so')
|
|
source('example_wrap.S')
|
|
</pre>
|
|
These two files can be loaded in any order
|
|
</p>
|
|
|
|
<h2>General policy</h2>
|
|
The general policy of the module is to treat the C/C++ as a basic
|
|
wrapping over the underlying functions and rely on the R type system
|
|
to provide R syntax.
|
|
|
|
<h2>Language conventions</h2>
|
|
getitem and setitem use C++ conventions (i.e. zero based indices). [<-
|
|
and [ are overloaded to allow for R syntax (one based indices and
|
|
slices)
|
|
|
|
<h2>C++ classes</h2>
|
|
C++ objects are implemented as external pointer objects with the class
|
|
being the mangled name of the class. The C++ classes are encapsulated
|
|
as an SEXP with an external pointer type. The class is the mangled
|
|
name of the class. The nice thing about R is that is allows you to
|
|
keep track of the pointer object which removes the necessity for a lot
|
|
of the proxy class baggage you see in other languages.
|
|
|
|
<h2>Enumerations</h2>
|
|
enumerations are characters which are then converted back and forth to
|
|
ints before calling the C routines. All of the enumeration code is
|
|
done in R.
|
|
</body>
|
|
</html>
|